miRBase entry: bmo-mir-2854

Stem-loop bmo-mir-2854


Accession
MI0012995
Description
Bombyx mori bmo-mir-2854 precursor miRNA

Literature search
1 open access papers mention bmo-mir-2854
(1 sentences)

Sequence

300 reads, 70 reads per million, 3 experiments
aagcccuuuuUCUUUCAAAACUGCAGGACGGccuuuauacguggccuuuuccaguuuacgcagcuaaaugaagugguuuc
(((((((((..((....((((((.((((.((((.........)))))))).))))))....))......)))).))))).

Structure
-     -    ----uU  UUCA      C    C    uuu 
 aagcc cuuu      CU    AAACUG AGGA GGcc   a
 ||||| ||||      ||    |||||| |||| ||||   u
 uuugg gaag      ga    uuugac uuuu ccgg   a
c     u    uaaauc  cgca      c    -    ugc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004581840.1: 40728-40807 [-]

Database links

Mature bmo-miR-2854

Accession MIMAT0013789
Description Bombyx mori bmo-miR-2854 mature miRNA
Sequence 11 - UCUUUCAAAACUGCAGGACGG - 31
Evidence not_experimental
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148