miRBase entry: bmo-mir-2780d

Stem-loop bmo-mir-2780d


Accession
MI0012462
Description
Bombyx mori bmo-mir-2780d precursor miRNA
Gene family
MIPF0000828; mir-2780


Sequence

386 reads, 59 reads per million, 3 experiments
accacggugaAAAGGUGUUAAAUGAAGACUUAGggcuucgagcauaucgaagaaaaacaggacaucguuugaaugcucgucuaaugga
.(((....((..((...((((((((.(.(((....((((((.....))))))......))).).))))))))...))..))...))).

Structure
a   cggu  AA  GUG        A A   --AGgg      g 
 cca    ga  AG   UUAAAUGA G CUU      cuucga c
 |||    ||  ||   |||||||| | |||      |||||| a
 ggu    cu  uc   aguuugcu c gga      gaagcu u
a   -aau  gc  gua        a a   caaaaa      a 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
NW_004612316.1: 74-161 [-]

Database links

Mature bmo-miR-2780d

Accession MIMAT0013765
Description Bombyx mori bmo-miR-2780d mature miRNA
Sequence 11 - AAAGGUGUUAAAUGAAGACUUAG - 33
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148