miRBase entry: bmo-mir-2843-1

Stem-loop bmo-mir-2843-1


Accession
MI0012456
Description
Bombyx mori bmo-mir-2843-1 precursor miRNA
Gene family
MIPF0001044; mir-2843


Sequence

1478 reads, 260 reads per million, 3 experiments
ggcuuuggagUCUAAGGAAAUUAGGUCGGAUACAuacgaauuagugugUUUGCGACGCUGUCUUCGUGAUCAAgccu
(((((.(..(((....(((..(((((((.(.((((((......)))))).).)))).)))..)))..))))))))).

Structure
-     u ga   UAAG   AU   -    G U      ga 
 ggcuu g  gUC    GAA  UAG GUCG A ACAuac  a
 ||||| |  |||    |||  ||| |||| | ||||||   
 ccgAA C  UAG    CUU  GUC CAGC U Ugugug  u
u     - --   --UG   CU   G    G U      au 


Annotation confidence Not enough data
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Genome context
NW_004609009.1: 239-315 [+]

Database links

Mature bmo-miR-2843-1-3p

Accession MIMAT0013763
Description Bombyx mori bmo-miR-2843-1-3p mature miRNA
Sequence 49 - UUUGCGACGCUGUCUUCGUGAUCAA - 73
Evidence experimental
Illumina [1]

Mature bmo-miR-2843-5p

Accession MIMAT0013762
Description Bombyx mori bmo-miR-2843-5p mature miRNA
Sequence 11 - UCUAAGGAAAUUAGGUCGGAUACA - 34
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148