miRBase entry: bmo-mir-2820-1

Stem-loop bmo-mir-2820-1


Accession
MI0012404
Description
Bombyx mori bmo-mir-2820-1 precursor miRNA
Gene family
MIPF0001034; mir-2820


Sequence

19 reads, 5 reads per million, 3 experiments
cgucaagccuauucaugauccuuuugcaucgugcaucguacauggccuuggcggcacgcaCAGCAAGAUGGAACGUGAAUAaggcgcuuaa
......(((((((((((.(((((((((..(((((..(((.((......))))))))))....)))))).))).))))))).))))......

Structure
cgucaa    -       a   -      --au     au   a  ug 
      gccu auucaug ucc uuuugc    cgugc  cgu ca  g
      |||| ||||||| ||| ||||||    |||||  ||| ||   
      cgga UAAGUGC AGG AGAACG    gcacg  gcg gu  c
aauucg    A       A   U      ACac     --   -  uc 


Annotation confidence Not enough data
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Genome context
NW_004582035.1: 4601239-4601329 [-]

Database links

Mature bmo-miR-2820

Accession MIMAT0013730
Description Bombyx mori bmo-miR-2820 mature miRNA
Sequence 61 - CAGCAAGAUGGAACGUGAAUA - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148