miRBase entry: bmo-mir-2810

Stem-loop bmo-mir-2810


Accession
MI0012390
Description
Bombyx mori bmo-mir-2810 precursor miRNA


Sequence

229 reads, 50 reads per million, 3 experiments
aaguaaagagAGAUUUUCGAGAACAGCUAAUUcggcugcguggcuguugcgcagaagaugcucagcguugccu
..((((...(((((((((..(((((((((...((....)))))))))).)...)))))).)))....))))..

Structure
aa    -aga   -      -GA -        AUU  g 
  guaa    gAG AUUUUC   G AACAGCUA   cg c
  ||||    ||| ||||||   | ||||||||   ||  
  cguu    cuc uagaag   c uugucggu   gc u
uc    gcga   g      acg g        ---  g 


Annotation confidence Not enough data
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Genome context
NW_004581689.1: 1792245-1792317 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-2810
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-2810

Accession MIMAT0013718
Description Bombyx mori bmo-miR-2810 mature miRNA
Sequence 11 - AGAUUUUCGAGAACAGCUAAUU - 32
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148