miRBase entry: bmo-mir-2808a-1

Stem-loop bmo-mir-2808a-1


Accession
MI0012388
Description
Bombyx mori bmo-mir-2808a-1 precursor miRNA
Gene family
MIPF0000836; mir-2808

Literature search
1 open access papers mention bmo-mir-2808a-1
(1 sentences)

Sequence

500 reads, 114 reads per million, 3 experiments
agccgugcuuCGUAGAAUCUACCAUCGGAUCGgaaacgcgauccacugagaagauccggcgagaaacucagugggcug
((((..(((((((.(.((((.(((..((((((......))))))..)).).)))).).)))).......))).)))).

Structure
-    gu   -------    A A    A -  UC      ga 
 agcc  gcu       uCGU G AUCU C CA  GGAUCG  a
 ||||  |||       |||| | |||| | ||  ||||||   
 ucgg  uga       agcg c uaga g gu  ccuagc  a
g    -g   cucaaag    g c    a a  ca      gc 


Annotation confidence Low
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Genome context
NW_004582008.1: 2091354-2091431 [-]

Database links

Mature bmo-miR-2808a-5p

Accession MIMAT0013711
Description Bombyx mori bmo-miR-2808a-5p mature miRNA
Sequence 11 - CGUAGAAUCUACCAUCGGAUCG - 32
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148