Stem-loop sequence bmo-mir-2774a-4

Accession

MI0012337 (change log)

Description

Bombyx mori miR-2774a-4 stem-loop

Gene family

MIPF0000829; mir-2774

Literature search

1 open access papers mention bmo-mir-2774a-4
(2 sentences)

Stem-loop

   aca  a   uuc    c   gg           aua 
5'    ac aca   ggac guc  ucuaccgagca   u
      || |||   |||| |||  |||||||||||    
3'    ug ugu   ccug uag  agguggcucgu   u
   aua  c   uuc    c   -a           cca 

Deep sequencing

1036 reads, 0 reads per million, 3 experiments

Confidence

Annotation confidence: high

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Genome context

• Coordinates (ASM15162v1; GCA_000151625.1): NW_004581683.1: 2996498-2996570 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0012337

Mature sequence bmo-miR-2774a

• Accession: MIMAT0013658
• Sequence: 44 - cucgguggaagaucgucccu - 63
• Deep sequencing: 3097 reads, 3 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS0000421959_7091

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).