miRBase entry: bmo-mir-2772a-1

Stem-loop bmo-mir-2772a-1


Accession
MI0012329
Description
Bombyx mori bmo-mir-2772a-1 precursor miRNA
Gene family
MIPF0000906; mir-2772


Sequence

1506 reads, 227 reads per million, 3 experiments
uucuuugccuuaucuccaaacucaaagugguaccagcaguguggauggucaucuggucguugccgUGUUUGAGUUCUGGACCUGGAgcguaugugg
.....((((((...((((((((((((.(((((((((..(((........))))))))....))))..)))))))).))))....))).))).....

Structure
uucuu   -   -auc    -        -g    ----     ca   ugg 
     ugc cuu    ucca aacucaaa  uggu    accag  gug   a
     ||| |||    |||| ||||||||  ||||    |||||  |||    
     aug gAG    AGGU UUGAGUUU  gccg    ugguc  uac   u
ggugu   c   GUCC    C        GU    uugc     --   ugg 


Annotation confidence Not enough data
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Genome context
NW_004581679.1: 3279730-3279825 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-2772a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-2772a

Accession MIMAT0013656
Description Bombyx mori bmo-miR-2772a mature miRNA
Sequence 66 - UGUUUGAGUUCUGGACCUGGA - 86
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148