Stem-loop sequence bmo-mir-2771

Accession

MI0012328 (change log)

Description

Bombyx mori miR-2771 stem-loop

Stem-loop

   u     cuuuua      c a -ga  g  -u  --g        guc   ac 
5'  cccaa      acauua g g   ug gu  ua   uuagggga   cca  u
    |||||      |||||| | |   || ||  ||   ||||||||   |||   
3'  ggguu      uguaau c c   ac ua  au   aguccccu   ggu  g
   -     -accca      - a aag  g  uu  aga        ---   ga 

Deep sequencing

61 reads, 0 reads per million, 3 experiments

Confidence

Annotation confidence: high

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Genome context

Coordinates (ASM15162v1; GCA_000151625.1)	Overlapping transcripts
NW_004581693.1: 641837-641934 [+]	intergenic
NW_004582010.1: 8728805-8728902 [-]	intergenic

Database links

• miRBase Tracker:MI0012328

Mature sequence bmo-miR-2771-5p

• Accession: MIMAT0013654
• Previous IDs: bmo-miR-2771*
• Sequence: 11 - uaacauuacgaggauggguuuaguua - 36
• Deep sequencing: 6 reads, 2 experiments
• Evidence: experimental; Illumina [1]

Mature sequence bmo-miR-2771-3p

• Accession: MIMAT0013655
• Previous IDs: bmo-miR-2771
• Sequence: 67 - auauuaugcagaacacuaaugu - 88
• Deep sequencing: 55 reads, 3 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS0000038491_7091

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).