miRBase entry: bmo-mir-998

Stem-loop bmo-mir-998


Accession
MI0012295
Description
Bombyx mori bmo-mir-998 precursor miRNA
Gene family
MIPF0000952; mir-998


Sequence

692 reads, 135 reads per million, 3 experiments
cucggucgcgagcugccucccgugcggcugcagugcucgcgugUAGCACCAUGGGAUUCAGCUcacggccgcu
..((((((.((((((..(((((((..((((((((....)).))))))..)))))))..)))))).))))))..

Structure
cu      c      cc       cg      -  g 
  cggucg gagcug  ucccgug  gcugca gu c
  |||||| ||||||  |||||||  |||||| ||  
  gccggc cUCGAC  AGGGUAC  CGAUgu cg u
uc      a      UU       CA      g  c 


Annotation confidence Not enough data
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Genome context
NW_004581691.1: 1166010-1166082 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-998
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-998

Accession MIMAT0013603
Description Bombyx mori bmo-miR-998 mature miRNA
Sequence 44 - UAGCACCAUGGGAUUCAGCU - 63
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148