Stem-loop sequence bmo-mir-2745

AccessionMI0012196 (change log)
DescriptionBombyx mori miR-2745 stem-loop
Stem-loop
   a     g      -        uu        u   uuu 
5'  gugcc uugaug gcccgaaa  ccgaauuu agc   a
    ||||| |||||| ||||||||  |||||||| |||   u
3'  cacgg aacuau cgggcuuu  ggcuuaaa ucg   u
   c     a      a        cu        -   uaa 
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Deep sequencing
7013 reads, 1.17e+03 reads per million, 3 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM15162v1; GCA_000151625.1) Overlapping transcripts
NW_004582030.1: 2421486-2421564 [-]
intergenic
Clustered miRNAs
< 10kb from bmo-mir-2745
bmo-mir-2760NW_004582030.1: 2421649-2421739 [-]
bmo-mir-2745NW_004582030.1: 2421486-2421564 [-]
Database links

Mature sequence bmo-miR-2745

Accession MIMAT0012624
Sequence

47 - 

uaaauucggucuuucgggc

 - 65

Get sequence
Deep sequencing7006 reads, 3 experiments
Evidence experimental; cloned [1], RT-PCR [1], SOLID [2]
Database links

References

1
PMID:19699294 "A discovery of novel microRNAs in the silkworm (Bombyx mori) genome" Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J Genomics. 94:438-444(2009).
2
PMID:20229201 "Novel microRNAs in silkworm (Bombyx mori)" Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J Funct Integr Genomics. 10:405-415(2010).