miRBase entry: bmo-mir-274

Stem-loop bmo-mir-274


Accession
MI0010624
Description
Bombyx mori bmo-mir-274 precursor miRNA
Gene family
MIPF0000264; mir-274

Literature search
3 open access papers mention bmo-mir-274
(16 sentences)

Sequence

13852 reads, 2676 reads per million, 3 experiments
ggcuguuguuaggcgaaguugGUUUGUGACCGUCACUAACGGGCAGUguuaauacgguugcUCGUUUUGGCGAUCGCAAAAUGaacucgcuugac
.......(((((((((.(((.((((((((.(((((..((((((((.(((....)))..)))))))).))))).)))).)))).))))))))))))GGCACAUUCGUGAUCUACCCUGUAGAUCCGGGCUUUCGUAAAAAACAAAUCGAAAGCUCGUCUCUACAGGUAUAUCACGGCUGGCCCACGCCACCUUUUCUACAAUUAGUCAAGAACUG

Structure
Error: Sequence and structure lengths do not match for bmo-mir-274.


Annotation confidence High
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Genome context
NW_004581747.1: 1284148-1284242 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from bmo-mir-274
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-274-5p

Accession MIMAT0010127
Description Bombyx mori bmo-miR-274-5p mature miRNA
Sequence 22 - GUUUGUGACCGUCACUAACGGGCAGU - 47
Evidence experimental
Illumina [2]
Database links

Mature bmo-miR-274-3p

Accession MIMAT0015296
Description Bombyx mori bmo-miR-274-3p mature miRNA
Sequence 62 - UCGUUUUGGCGAUCGCAAAAUG - 83
Evidence experimental
Illumina [2]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148