miRBase entry: bmo-mir-929

Stem-loop bmo-mir-929


Accession
MI0010001
Description
Bombyx mori bmo-mir-929 precursor miRNA
Gene family
MIPF0000447; mir-929

Literature search
1 open access papers mention bmo-mir-929
(1 sentences)

Sequence

7 reads, 3 reads per million, 3 experiments
uguuaaAUUGACUCUAGUAGGGAGUCCguuccgcgcgaCUCCCUAAUCGAGUCAGGUUGAcuucuuugaugcuaaaucgacg
.(((((.(((((((...((((((((((((...))).)))))))))...))))))).)))))....(((((.....)))))..

Structure
--------------------u     A       UAG         -   u 
                     guuaa UUGACUC   UAGGGAGUC Cgu  
                     ||||| |||||||   ||||||||| ||| c
                     cAGUU GACUGAG   AUCCCUCag gcg  
gcagcuaaaucguaguuucuu     G       CUA         c   c 


Annotation confidence Not enough data
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Genome context
NW_004582032.1: 396204-396285 [+]

Database links

Mature bmo-miR-929-5p

Accession MIMAT0009158
Description Bombyx mori bmo-miR-929-5p mature miRNA
Sequence 7 - AUUGACUCUAGUAGGGAGUCC - 27
Evidence experimental
Illumina [2]

Mature bmo-miR-929-3p

Accession MIMAT0015289
Description Bombyx mori bmo-miR-929-3p mature miRNA
Sequence 39 - CUCCCUAAUCGAGUCAGGUUGA - 60
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148

  2. PubMed ID: 18714353
    The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages
    Yu X, Zhou Q, Li SC, Luo Q, Cai Y, Lin WC, Chen H, Yang Y, Hu S, Yu J
    PLoS One (2008) 3:e2997