miRBase entry: bmo-mir-1923

Stem-loop bmo-mir-1923


Accession
MI0008393
Description
Bombyx mori bmo-mir-1923 precursor miRNA
Gene family
MIPF0000930; mir-1923

Literature search
2 open access papers mention bmo-mir-1923
(2 sentences)

Sequence

19 reads, 7 reads per million, 3 experiments
ucgaaacuugccauuuaaaauggugccuucgauaacuuuuuucauuaauuuuuaaugacUAAUCGCGUACCGUUGCAUAGCCGUGGCgg
........((((((....((((((((...((((.....(..(((((((...)))))))..))))).))))))))........)))))).

Structure
ucgaaacu      ----uuaa        cuu    aacuu uu       u 
        ugccau        aauggugc   cgau     u  ucauuaa  
        ||||||        ||||||||   ||||     |  ||||||| u
        gCGGUG        UUGCCAUG   GCUA     A  aguaauu  
-------g      CCGAUACG        --C    ----- Uc       u 


Annotation confidence Not enough data
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Genome context
NW_004590653.1: 148-236 [-]

Database links

Mature bmo-miR-1923

Accession MIMAT0007932
Description Bombyx mori bmo-miR-1923 mature miRNA
Sequence 60 - UAAUCGCGUACCGUUGCAUAGCCGUGGC - 87
Evidence experimental
cloned [1], Illumina [2]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148

  2. PubMed ID: 18714353
    The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages
    Yu X, Zhou Q, Li SC, Luo Q, Cai Y, Lin WC, Chen H, Yang Y, Hu S, Yu J
    PLoS One (2008) 3:e2997