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miRBase |
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Stem-loop sequence gga-mir-17 |
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Accession | MI0001184 (change log) | |||||||||||||
Description | Gallus gallus miR-17 stem-loop | |||||||||||||
Gene family | MIPF0000001; mir-17 | |||||||||||||
Literature search |
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19 open access papers mention gga-mir-17 | |||||||||||||
Stem-loop |
a -ca a g gua gaua 5' gucag guaaugu aagugcuu ca ugcag gu u ||||| ||||||| |||||||| || ||||| || 3' caguu uauuacg uucacgga gu acguc ca a g aug a g auc agau |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence gga-miR-17-5p |
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Accession | MIMAT0001114 |
Sequence |
14 - caaagugcuuacagugcagguagu - 37 |
Deep sequencing | 73638 reads, 5 experiments |
Evidence | experimental; cloned [2] |
Database links |
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Predicted targets |
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Mature sequence gga-miR-17-3p |
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Accession | MIMAT0001115 |
Sequence |
52 - acugcagugaaggcacuugu - 71 |
Deep sequencing | 6500 reads, 5 experiments |
Evidence | by similarity; MI0000071 |
Database links |
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Predicted targets |
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References |
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1 |
PMID:15592404
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"
Nature. 432:695-716(2004).
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2 |
PMID:18256158
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs"
J Virol. 82:4007-4015(2008).
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3 |
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Unpublished.
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4 |
PMID:18256158
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs"
J Virol. 82:4007-4015(2008).
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