Stem-loop pab-MIR11563

Accession

MI0037061

Description

Picea abies pab-MIR11563 precursor miRNA

Sequence

81 reads, 26.0 reads per million, 28 experiments

uaaagcuagccacaaaagaucagaaagaagaaucaaagaagacacugacaggucuaucuccuaguaugauuccacacuucaacagacaugaaauuacuaggcaauuucagauucaagccccaacauucuucuUUCUGAUAUUUUGUGGCUAGCuuua
(((((((((((((((((.(((((((((((((((...(((((((........)))).)))(((((((...(((....((.....))....)))..))))))).......................))))))))))))))).)))))))))))))))))

Structure

                 g               caaagaagacacugacaggucuaucu       uga   caca  u 
uaaagcuagccacaaaa aucagaaagaagaau                          ccuagua   uuc    cu c
||||||||||||||||| |||||||||||||||                          |||||||   |||    || a
auuuCGAUCGGUGUUUU UAGUCUUucuucuua                          ggaucau   aag    ga a
                 A               ---caaccccgaacuuagacuuuaac       -ua   uaca  c 

Annotation confidence Not enough data

Genome context

MA_82302: 12568-12724 [-]

Mature pab-miR11563-3p

• Accession: MIMAT0045159
• Description: Picea abies pab-miR11563-3p mature miRNA
• Sequence: 133 - UUCUGAUAUUUUGUGGCUAGC - 153
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918