Stem-loop pab-MIR11542

Accession

MI0037029

Description

Picea abies pab-MIR11542 precursor miRNA

Sequence

ucagcaacucguuucgccauuuugaUGCGGAGCUUUUCAAAAAUUCuuaucuuuuugagacaguccucucaaagagacacggauuuuugaaaagcucugcaucaaaauggcgaaacgaguugucga
((.(((((((((((((((((((((((((((((((((((((((((((...(((((((((((......)))))))))))...))))))))))))))))))))))))))))))))))))))))))).))

Structure

  a                                           uua           ca 
uc gcaacucguuucgccauuuugaUGCGGAGCUUUUCAAAAAUUC   ucuuuuugaga  g
|| |||||||||||||||||||||||||||||||||||||||||||   |||||||||||   
ag uguugagcaaagcgguaaaacuacgucucgaaaaguuuuuagg   agagaaacucu  u
  c                                           cac           cc 

Annotation confidence Not enough data

Genome context

MA_7913141: 1398-1523 [+]

Mature pab-miR11542

• Accession: MIMAT0045127
• Description: Picea abies pab-miR11542 mature miRNA
• Sequence: 26 - UGCGGAGCUUUUCAAAAAUUC - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918