Stem-loop pab-MIR11538

Accession

MI0037024

Description

Picea abies pab-MIR11538 precursor miRNA

Sequence

guuuuuuuauucaguuaguacuuuuguguuguauuugacaguuuuuaauggcuucuucugcagcugggaauggcuagugcagUGCAGACUGUGUGUGGACAAGc
((((...(((.(((((.(((((.....((((((...((.((((......))))))...))))))........((....))))))).))))).))).))))....

Structure

----    uuu   u     a     -----------uuugu      uuu  c    uu 
    guuu   uau caguu guacu                guugua   ga aguu  u
    ||||   ||| ||||| |||||                ||||||   || ||||   
    CAGG   GUG GUCAG CGUga                cgacgu   cu ucgg  a
cGAA    --U   U     A     cgugaucgguaagggu      cuu  -    ua 

Annotation confidence Not enough data

Genome context

MA_45692: 15269-15372 [-]

Mature pab-miR11538

• Accession: MIMAT0045122
• Description: Picea abies pab-miR11538 mature miRNA
• Sequence: 83 - UGCAGACUGUGUGUGGACAAG - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918