Stem-loop pab-MIR11511

Accession

MI0036975

Description

Picea abies pab-MIR11511 precursor miRNA

Sequence

2927894 reads, 130656.0 reads per million, 102 experiments

cgcuucauaguuaucggUCCAACGAAGAUCAGAAGGCUUcacaucguagaaauccggaccaauaaaggugaagguguuugUAUGAUGUUAAGCUUCUGACCUuuguuggacgaguaaagauggggug
((((((((..((((..(((((((((((.(((((((.(((.((((((((.((((((..(((......)))...)).)))).)))))))).)))))))))).)))))))))))..))))..))))))))

Structure

        ag    cg           A       G   c        g    -  -gg   aa 
cgcuucau  uuau  gUCCAACGAAG UCAGAAG CUU acaucgua aaau cc   acc  u
||||||||  ||||  ||||||||||| ||||||| ||| |||||||| |||| ||   |||   
guggggua  aaug  cagguuguuUC AGUCUUC GAA UGUAGUAU uuug gg   ugg  a
        ga    ag           C       -   U        g    u  aag   aa 

Annotation confidence Medium

Genome context

MA_30269: 9968-10094 [-]

Mature pab-miR11511-5p

• Accession: MIMAT0045073
• Description: Picea abies pab-miR11511-5p mature miRNA
• Sequence: 18 - UCCAACGAAGAUCAGAAGGCUU - 39
• Evidence: experimental ; Illumina [1]

Mature pab-miR11511-3p

• Accession: MIMAT0057742
• Description: Picea abies pab-miR11511-3p mature miRNA
• Sequence: 81 - UAUGAUGUUAAGCUUCUGACCU - 102
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918