Stem-loop pab-MIR11490b

Accession

MI0036947

Description

Picea abies pab-MIR11490b precursor miRNA

Sequence

1627 reads, 171.0 reads per million, 94 experiments

auaacucgauuguguauucggucuauuCGAUGGACAAACAGUGAAGCUcacuguagauucgucgaaUAGCCCGAACGCACAAUUGGUuuga
..(((.(((((((((.(((((.((((((((((((...(((((((...)))))))...)))))))))))).))))).))))))))))))...

Structure

-au   u         a     u            CAA       A 
   aac cgauugugu uucgg cuauuCGAUGGA   ACAGUGA  
   ||| ||||||||| ||||| ||||||||||||   ||||||| G
   uUG GUUAACACG AAGCC GAUaagcugcuu   ugucacU  
agu   -         C     C            aga       C 

Annotation confidence Low

Genome context

MA_10425949: 15380-15470 [-]

Mature pab-miR11490b-5p

• Accession: MIMAT0057716
• Description: Picea abies pab-miR11490b-5p mature miRNA
• Sequence: 28 - CGAUGGACAAACAGUGAAGCU - 48
• Evidence: experimental ; unknown

Mature pab-miR11490b-3p

• Accession: MIMAT0045045
• Description: Picea abies pab-miR11490b-3p mature miRNA
• Sequence: 67 - UAGCCCGAACGCACAAUUGGU - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918