Stem-loop pab-MIR11490a

Accession

MI0036946

Description

Picea abies pab-MIR11490a precursor miRNA

Sequence

1671 reads, 171.0 reads per million, 94 experiments

uaacucgauuguguauucggucuauuCGAUGGACAAACAGUGAAGCUcacuguagguucgucgaaUAGCCCGAACGCACAAUUGGUuua
.(((.(((((((((.(((((.(((((((((((((..(((((((...)))))))..))))))))))))).))))).))))))))))))..

Structure

-u   u         a     u             AA       A 
  aac cgauugugu uucgg cuauuCGAUGGAC  ACAGUGA  
  ||| ||||||||| ||||| |||||||||||||  ||||||| G
  uUG GUUAACACG AAGCC GAUaagcugcuug  ugucacU  
au   -         C     C             ga       C 

Annotation confidence Low

Genome context

MA_10425949: 1173-1261 [-]

Mature pab-miR11490a-5p

• Accession: MIMAT0057715
• Description: Picea abies pab-miR11490a-5p mature miRNA
• Sequence: 27 - CGAUGGACAAACAGUGAAGCU - 47
• Evidence: experimental ; unknown

Mature pab-miR11490a-3p

• Accession: MIMAT0045044
• Description: Picea abies pab-miR11490a-3p mature miRNA
• Sequence: 66 - UAGCCCGAACGCACAAUUGGU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918