Stem-loop pab-MIR11482

Accession

MI0036932

Description

Picea abies pab-MIR11482 precursor miRNA

Sequence

610859 reads, 14659.0 reads per million, 102 experiments

uauuAAUUGCAAAAGGAUUGGUUAGGacuaaacaaacaaccucuugucuguuuugucuUAACCAGUCCUUCUGCAAUCCAca
.....((((((.((((((((((((((((.(((((.((((....)))).))))).)))))))))))))))).)))))).....

Structure

uauuA      A                u     a    c 
     AUUGCA AAGGAUUGGUUAGGac aaaca acaa c
     |||||| |||||||||||||||| ||||| ||||  
     UAACGU UUCCUGACCAAUucug uuugu uguu u
acACC      C                u     c    c 

Annotation confidence High

Genome context

MA_10188267: 801-882 [-]

Mature pab-miR11482-5p

• Accession: MIMAT0057704
• Description: Picea abies pab-miR11482-5p mature miRNA
• Sequence: 5 - AAUUGCAAAAGGAUUGGUUAGG - 26
• Evidence: experimental ; unknown

Mature pab-miR11482-3p

• Accession: MIMAT0045030
• Description: Picea abies pab-miR11482-3p mature miRNA
• Sequence: 59 - UAACCAGUCCUUCUGCAAUCCA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918