Stem-loop pab-MIR11476a

Accession

MI0036920

Description

Picea abies pab-MIR11476a precursor miRNA

Sequence

auuucGAUUGCAGUAGGGUUGUUUAGCagugaacaaacaacccauuuaauggacgggccugaucgcugcccauauugacauguccauucuauuuguuguguuuuacucuuaagcagcccuucuccgauccaccu
.....(((((.((.((((((((((((.((((((...(((((..((..(((((((((((.........))))..........)))))))..))..)))))..)))))).)))))))))))).)).))))).....

Structure

auuuc     C  U            C      caa     cc  uu       ----------    cug 
     GAUUG AG AGGGUUGUUUAG agugaa   acaac  au  aauggac          gggc   a
     ||||| || |||||||||||| ||||||   |||||  ||  |||||||          ||||   u
     cuagc uc ucccgacgaauu ucauuu   uguug  ua  uuaccug          cccg   c
uccac     c  u            c      -ug     uu  uc       uacaguuaua    ucg 

Annotation confidence Not enough data

Genome context

MA_10433104: 2424-2557 [+]

Mature pab-miR11476a

• Accession: MIMAT0045018
• Description: Picea abies pab-miR11476a mature miRNA
• Sequence: 6 - GAUUGCAGUAGGGUUGUUUAGC - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918