Stem-loop pab-MIR11408b

Accession

MI0036888

Description

Picea abies pab-MIR11408b precursor miRNA

Sequence

acuagcacauacccaucUAAACCUUGGUCUGUAAUGCAucuugagguuccgaaauucaaggaugcauaucgggaguucacacaaaugacugauguaucaaauaauaugacuugagcuucccaaccuugagacgcauuucggacuugguuuuagaugggugugugcuggu
(((((((((((((((((((((((..((((((.(((((.((((((((((..(((.((((((((((((..((((..(((......)))..))))))))))...........)))))).)))..)))))))))).))))).)))))).)).)))))))))))))))))))))

Structure

                     -  UU      U     A          cc   a      -----------      ua    ga   ca 
acuagcacauacccaucUAAA CC  GGUCUG AAUGC ucuugagguu  gaa uucaag           gaugca  ucgg  guu  c
||||||||||||||||||||| ||  |||||| ||||| ||||||||||  ||| ||||||           ||||||  ||||  |||   
uggucguguguggguagauuu gg  ucaggc uuacg agaguuccaa  cuu gaguuc           cuaugu  aguc  uaa  a
                     u  -u      u     c          cc   c      aguauaauaaa      --    ag   ac 

Annotation confidence Not enough data

Genome context

MA_113665: 11233-11401 [+]

Mature pab-miR11408b

• Accession: MIMAT0044986
• Description: Picea abies pab-miR11408b mature miRNA
• Sequence: 18 - UAAACCUUGGUCUGUAAUGCA - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918