Stem-loop pab-MIR11442

Accession

MI0036868

Description

Picea abies pab-MIR11442 precursor miRNA

Sequence

auugucauugacguuucgaauccgaAUUGGGAUUCGUCAUCAGGACuaaucgucaauugauagcaaguuaucaauugacaauuauucaugaugaugaauccugauucggauucgaaacgucgauggcaau
((((((((((((((((((((((((((((((((((((((((((.((.((((.(((((((((((......))))))))))).)))).)).))))))))))))))))))))))))))))))))))))))))))

Structure

                                          G  C    c           gc 
auugucauugacguuucgaauccgaAUUGGGAUUCGUCAUCA GA uaau gucaauugaua  a
|||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||   
uaacgguagcugcaaagcuuaggcuuaguccuaaguaguagu cu auua caguuaacuau  a
                                          a  u    a           ug 

Annotation confidence Not enough data

Genome context

MA_9277130: 178-307 [+]

Mature pab-miR11442

• Accession: MIMAT0044966
• Description: Picea abies pab-miR11442 mature miRNA
• Sequence: 26 - AUUGGGAUUCGUCAUCAGGAC - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918