Stem-loop pab-MIR11429b

Accession

MI0036843

Description

Picea abies pab-MIR11429b precursor miRNA

Sequence

11446 reads, 392.0 reads per million, 61 experiments

cauaauagaaacaaggAGCAGCAUGACACCAAGGGCaacuguuaagauggugcugCCCUUGGUGUCAUGCAGCUCCuuguuucuacucaug
.....((((((((((((((.((((((((((((((((((((((....)))))..))))))))))))))))).))))))))))))))......

Structure

-cauaa              A                 --     u 
      uagaaacaaggAGC GCAUGACACCAAGGGCa  acugu a
      |||||||||||||| |||||||||||||||||  |||||  
      aucuuuguuCCUCG CGUACUGUGGUUCCCgu  uggua a
guacuc              A                 cg     g 

Annotation confidence High

Genome context

MA_6904059: 735-825 [-]

Mature pab-miR11429b-5p

• Accession: MIMAT0044941
• Description: Picea abies pab-miR11429b-5p mature miRNA
• Sequence: 17 - AGCAGCAUGACACCAAGGGC - 36
• Evidence: experimental ; Illumina [1]

Mature pab-miR11429b-3p

• Accession: MIMAT0057653
• Description: Picea abies pab-miR11429b-3p mature miRNA
• Sequence: 56 - CCCUUGGUGUCAUGCAGCUCC - 76
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918