Stem-loop pab-MIR11422a

Accession

MI0036827

Description

Picea abies pab-MIR11422a precursor miRNA

Sequence

3657 reads, 184.0 reads per million, 94 experiments

ugugauacagaACUCAGUAAUGUGCUUUUGGAugaacacauggguuugaucuauguuaaucCAAAGCACAUUGCUGGGUUUuauaucaca
(((((((.((((((((((((((((((((.((((....((((((((...))))))))..)))))))))))))))))))))))).)))))))

Structure

       c                    U    gaac        u 
ugugaua agaACUCAGUAAUGUGCUUU GGAu    acaugggu  
||||||| |||||||||||||||||||| ||||    |||||||| u
acacuau uUUUGGGUCGUUACACGAAA Ccua    uguaucua  
       a                    -    --au        g 

Annotation confidence Medium

Genome context

MA_52966: 4465-4554 [+]

Mature pab-miR11422a-5p

• Accession: MIMAT0044925
• Description: Picea abies pab-miR11422a-5p mature miRNA
• Sequence: 12 - ACUCAGUAAUGUGCUUUUGGA - 32
• Evidence: experimental ; Illumina [1]

Mature pab-miR11422a-3p

• Accession: MIMAT0057638
• Description: Picea abies pab-miR11422a-3p mature miRNA
• Sequence: 62 - CAAAGCACAUUGCUGGGUUU - 81
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918