Stem-loop pab-MIR11415

Accession

MI0036819

Description

Picea abies pab-MIR11415 precursor miRNA

Sequence

agauAAUUUGGUCUUCUCGGAAGGCagcagcuaaguacagaaagcacaauugcagauuaacguuguaguugcccagugcgucauaacucaaccugacgcaaucauagcuagcuugaaggccuugcugcagccucuggacugccaagucccac
.....(((((((..((.((((.(((.(((((.(((..(...((((.(((((((((.......))))))))).....(((((((..........)))))))..........))))...)..)))))))).)))))))))..))))))).....

Structure

agauA       CU  U    A   a     u   ua aga    --------------------------------------a         au 
     AUUUGGU  UC CGGA GGC gcagc aag  c   aagc                                       caauugcag  u
     |||||||  || |||| ||| ||||| |||  |   ||||                                       |||||||||  a
     ugaaccg  ag gucu ccg cgucg uuc  g   uucg                                       guugauguu  a
caccc       uc  -    -   a     -   cg aag    aucgauacuaacgcaguccaacucaauacugcgugaccc         gc 

Annotation confidence Not enough data

Genome context

MA_200743: 10032-10183 [+]

Mature pab-miR11415

• Accession: MIMAT0044917
• Description: Picea abies pab-miR11415 mature miRNA
• Sequence: 5 - AAUUUGGUCUUCUCGGAAGGC - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918