Stem-loop pab-MIR11408a

Accession

MI0036806

Description

Picea abies pab-MIR11408a precursor miRNA

Sequence

cuagcgcagaccccucuAAAGCUGGGUCUGAUGUGCACCucgagguuccaaagcuugaaguugcauaucuagaauuccaauauuugauauguugggucuuugagagguugcaaagcuugaaguugugcaucuagaguuccaauauuugauauguugauucuuuguucaacucaagauaugcauucuugaagauuuacaaccucaaggugcacaucagccccagguuagauggguaugugcuag
((((((((.((((.(((((..(((((.(((((((((((((.((((((..(((.(((.(((.(((((((((.((......(((((....((((((((.((((.(((...((((.((((...)))).))))))))))).))))))))..)))))(((((........))))))).)))))))))..))).))).)))..)))))).))))))))))))).))))).))))).)))).))))))))

Structure

        g    c     AG     U             c      cc   g   g   -u         a  ------------auucca     ugau        u    g   ggu    a    u 
cuagcgca accc ucuAA  CUGGG CUGAUGUGCACCu gagguu  aaa cuu aag  ugcauaucu ga                  auauu    auguuggg cuuu aga   ugca agcu  
|||||||| |||| |||||  ||||| ||||||||||||| ||||||  ||| ||| |||  ||||||||| ||                  |||||    |||||||| |||| |||   |||| |||| g
gaucgugu uggg agauu  gaccc gacuacacgugga cuccaa  uuu gaa uuc  acguauaga cu                  uauag    uauaaccu gaga ucu   acgu uuga  
        a    u     -g     c             a      ca   a   g   uu         a  caacuuguuucuuaguug     --uu        u    -   ---    g    a 

Annotation confidence Not enough data

Genome context

MA_348449: 2863-3105 [+]

Mature pab-miR11408a

• Accession: MIMAT0044904
• Description: Picea abies pab-miR11408a mature miRNA
• Sequence: 18 - AAAGCUGGGUCUGAUGUGCACC - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918