Accession
MI0036790
Description
Picea abies
pab-MIR946d precursor miRNA
Literature search
1 open access papers mention pab-MIR946d
(4 sentences)
(4 sentences)
Sequence
328552
reads,
10233.0
reads per million, 102 experiments
aaauugaugcguucagaguguacagaUGUGGAUAUAGAAGGGUUAGUuaguaaacaguacgaagcccaucuaauagagauuccaugagaggcauuuuauugcaagauguuggcuguucgagaucaagcgacuguguucgagcagugcauuuuaauggcaauacucauuaaauggguugccuguuuuuucuuuacCAGCCCUUCUGCUAUCCACAACaguacuaauuuguccacaucaauuu
(((((((((.(..((((..((((.(.((((((((((((((((((.((.((.((((((.....(((((((.((((.((((((((((.....(((......)))(((((((..((((((((((..((......))..))))))))))))))))).)))).))).))))))).)))))))..))))))...))..)).)))))))))).)))))))).).))))...))))..).)))))))))
(((((((((.(..((((..((((.(.((((((((((((((((((.((.((.((((((.....(((((((.((((.((((((((((.....(((......)))(((((((..((((((((((..((......))..))))))))))))))))).)))).))).))))))).)))))))..))))))...))..)).)))))))))).)))))))).).))))...))))..).)))))))))
Structure
c uu -gu a a - A -u --u uacga c a - - gagaggcauuuuauugc ug au ag
aaauugaug g caga guac g UGUGGAUA UAGAAGGGUU GU ag aaacag agcccau uaau gag auu ccau aagaugu gcuguucgag ca c
||||||||| | |||| |||| | |||||||| |||||||||| || || |||||| ||||||| |||| ||| ||| |||| ||||||| |||||||||| ||
uuuaacuac c guuu caug C ACACCUAU GUCUUCCCGA ca uc uuuguc uugggua auua cuc uaa ggua uuuuacg ugacgagcuu gu g
a cu aau a A C C uu uuu ---cg a - a c ----------------a -- gu ca
Annotation confidence
High
Do you think this miRNA is real?
Genome context
MA_53821: 9022-9262 [+]
Database links
Mature pab-miR946d-5p
| Accession | MIMAT0057611 |
| Description | Picea abies pab-miR946d-5p mature miRNA |
| Sequence | 27 - UGUGGAUAUAGAAGGGUUAGU - 47 |
| Evidence |
experimental
unknown |
Mature pab-miR946d-3p
| Accession | MIMAT0044888 |
| Description | Picea abies pab-miR946d-3p mature miRNA |
| Sequence | 195 - CAGCCCUUCUGCUAUCCACAAC - 216 |
| Evidence |
experimental
Illumina [1] |
References
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