Stem-loop pab-MIR535a

Accession

MI0036781

Description

Picea abies pab-MIR535a precursor miRNA

Sequence

uggaagauauuugggUGACAACGAGAGAGAGCACGCuuguggaaauccauggacauucauguaaaauacaugugucuacaggcgugcucucuuguugucacccgaauuuuguuca
..(((.(.((((((((((((((..((((((((((((((((((....)))((((((..((((((...)))))))))))))))))))))))))))))))))))))))))..).))).

Structure

ug   g -u              GA               uggaaaucca      uu      a 
  gaa a  auuugggUGACAAC  GAGAGAGCACGCuug          uggaca  caugua  
  ||| |  ||||||||||||||  |||||||||||||||          ||||||  |||||| a
  cuu u  uaagcccacuguug  uucucucgugcggac          aucugu  guacau  
-a   g uu              --               ----------      --      a 

Annotation confidence Not enough data

Genome context

MA_10219691: 1831-1945 [+]

Mature pab-miR535a

• Accession: MIMAT0044879
• Description: Picea abies pab-miR535a mature miRNA
• Sequence: 16 - UGACAACGAGAGAGAGCACGC - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918