Stem-loop pab-MIR482v

Accession

MI0036750

Description

Picea abies pab-MIR482v precursor miRNA

Literature search

1 open access papers mention pab-MIR482v
(5 sentences)

Sequence

10005 reads, 890.0 reads per million, 96 experiments

cuuaugggaguaguggaAAUGGGUAAAGUUGAAAGAccucuuuccauuguggauagggcggUCUUUCCACUUCUACCCAUUUCcgcuauuucacuaag
((((..(((((((((((((((((((((((.((((((((((((((((...)))).)))).)))))))).)))).)))))))))))))))))))..))))

Structure

    ug                   -    U        -    -    u 
cuua  ggaguaguggaAAUGGGUA AAGU GAAAGAcc ucuu ucca  
||||  ||||||||||||||||||| |||| |||||||| |||| |||| u
gaau  cuuuaucgcCUUUACCCAU UUCA CUUUCUgg ggga aggu  
    ca                   C    C        c    u    g 

Annotation confidence High

Genome context

MA_876101: 2951-3048 [-]

Mature pab-miR482v-5p

• Accession: MIMAT0057580
• Description: Picea abies pab-miR482v-5p mature miRNA
• Sequence: 18 - AAUGGGUAAAGUUGAAAGA - 36
• Evidence: experimental ; unknown

Mature pab-miR482v-3p

• Accession: MIMAT0044848
• Description: Picea abies pab-miR482v-3p mature miRNA
• Sequence: 62 - UCUUUCCACUUCUACCCAUUUC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918