Stem-loop pab-MIR3701h

Accession

MI0036727

Description

Picea abies pab-MIR3701h precursor miRNA

Literature search

1 open access papers mention pab-MIR3701h
(4 sentences)

Sequence

CGAAGGGUCGGACUUGUUUAGCagaagaguuuucucuguugcaggauauggaugauuugccaaaauuuuucuaucaaaucgaaaggcuacaguagcuuuaaugcaauuuguuugguaauaucuucuauauucuuugccccuaaaaauucuucucuugaacaaugcccacccuucgucucuggacauauucccaugcc
((((((((.((..((((((((.(((((((((((.......((((((((((((.(((((((((((..........(((((((.(((((((...)))))))..))..))))))))))))).))).)))))))))..))).....))))))))))).))))))))..)).))))))))....(((........)))....

Structure

----------------------        C  AC        C           cucuguu   --         u   -        auuuuucuau     --  -a       c 
                      CGAAGGGU GG  UUGUUUAG agaagaguuuu       gca  ggauaugga gau uugccaaa          caaau  cg  aaggcua  
                      |||||||| ||  |||||||| |||||||||||       |||  ||||||||| ||| ||||||||          |||||  ||  ||||||| a
                      gcuuccca cc  aacaaguu ucuucuuaaaa       cgu  cuuauaucu cua aaugguuu          guuua  gu  uuucgau  
ccguacccuuauacaggucucu        c  gu        c           --auccc   uu         u   u        ----------     ac  aa       g 

Annotation confidence Not enough data

Genome context

MA_8836430: 1717-1913 [-]

Mature pab-miR3701h

• Accession: MIMAT0044825
• Description: Picea abies pab-miR3701h mature miRNA
• Sequence: 1 - CGAAGGGUCGGACUUGUUUAGC - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918