Stem-loop pab-MIR3701d

Accession

MI0036722

Description

Picea abies pab-MIR3701d precursor miRNA

Literature search

1 open access papers mention pab-MIR3701d
(4 sentences)

Sequence

agacgaaggguaggaguuguuugguagaagaguuuucucuguugcaggauaugggggguuuuccaaaauauuuuccaucaaaucaaagggcuacaguggcuuuauugcaauuuguuuggcaauauccucuauauucuucuacccuaaaaauucuucucuUAAACAAUGCCCACCCUUCAUCu
(((.(((((((.((.(((((((((.(((((((((((....((.(.((((((((((((((.(((((((...........(((((((((((((((...))))))).)))..)))))))))).)).)))))))))))))).).))....))))))))))).))))))))).)).))))))).)))

Structure

   c       a  a         u           cucu  u c              u  -     auauuuuccau     --   -       c 
aga gaagggu gg guuguuugg agaagaguuuu    gu g aggauauggggggu uu ccaaa           caaau  caa agggcua  
||| ||||||| || ||||||||| |||||||||||    || | |||||||||||||| || |||||           |||||  ||| ||||||| a
uCU CUUCCCA CC UAACAAAUu ucuucuuaaaa    ca c ucuuauaucuccua aa gguuu           guuua  guu uuucggu  
   A       C  G         c           aucc  u u              u  c     -----------     ac   a       g 

Annotation confidence Not enough data

Genome context

MA_173634: 8141-8322 [-]

Mature pab-miR3701d

• Accession: MIMAT0044820
• Description: Picea abies pab-miR3701d mature miRNA
• Sequence: 160 - UAAACAAUGCCCACCCUUCAUC - 181
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918