Stem-loop pab-MIR2111

Accession

MI0036710

Description

Picea abies pab-MIR2111 precursor miRNA

Sequence

ggacaaugagcagaUAAUCUGCAUCCUGGGGUUUGagacucggaacaaaucgugucaugccuaacaaacccuagaaugcagauuauccucucgucguuc
((((.(((((..((((((((((((.((((((((((.(((.((........)).)))........)))))))))).))))))))))))..))))).))))

Structure

    a     ca            C          -------a   u  gaa 
ggac augag  gaUAAUCUGCAU CUGGGGUUUG        gac cg   c
|||| |||||  |||||||||||| ||||||||||        ||| ||    
cuug ugcuc  cuauuagacgua gaucccaaac        cug gc   a
    c     uc            a          aauccgua   u  uaa 

Annotation confidence Not enough data

Genome context

MA_466244: 5727-5825 [+]

Mature pab-miR2111

• Accession: MIMAT0044808
• Description: Picea abies pab-miR2111 mature miRNA
• Sequence: 15 - UAAUCUGCAUCCUGGGGUUUG - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918