Stem-loop pab-MIR11403

Accession

MI0036709

Description

Picea abies pab-MIR11403 precursor miRNA

Sequence

ugauguugucaacauuuaucuuguaaugaucgccucuuauacauggaaacaacugcccugucccuacaauuaaacacccaaagcuuuugcuuguugugaagggcccuguuaaaauaugcauugugauuaucaUUUAAAUGAGAUGACUGUCA
((((((((((..((((((...((..((((((((........((((..((((...(((((.((...(((((..........((((....))))))))))))))))..))))....))))....))))))))))..)))))).)))))).))))

Structure

    -      aa      ucu  ua        cucuuaua    --ga    acu     g  ccu     uaaacaccca    u 
ugau guuguc  cauuua   ug  augaucgc        caug    aaca   gcccu uc   acaau          aagc u
|||| ||||||  ||||||   ||  ||||||||        ||||    ||||   ||||| ||   |||||          ||||  
ACUG CAGUAG  GUAAAU   ac  uauuagug        guau    uugu   cggga ag   uguug          uucg u
    U      -A      -UU  --        ----uuac    aaaa    -cc     -  ---     ----------    u 

Annotation confidence Not enough data

Genome context

MA_54344: 7015-7166 [+]

Mature pab-miR11403

• Accession: MIMAT0044807
• Description: Picea abies pab-miR11403 mature miRNA
• Sequence: 133 - UUUAAAUGAGAUGACUGUCA - 152
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918