Stem-loop pab-MIR399d

Accession

MI0036693

Description

Picea abies pab-MIR399d precursor miRNA

Literature search

1 open access papers mention pab-MIR399d
(1 sentences)

Sequence

guuauugugcaggagaaucacaggauaacucuucuuuugccgggaauucugauuagauuugauuucugcacuuaauucauccaucuucauugccUGCCAAAGGAGAGUUGCCCUGcgauuguucuuuacaugau
(((((.(((.((((.((((.((((.((((((((((((.((.((.((...(((..((((.(((..............)))...))))))))).)).)).)))))))))))).)))).)))).)))).))))))))

Structure

     u   c    g    a    a            u  c  g  uuc   uu    --u   uuucug 
guuau gug agga aauc cagg uaacucuucuuu gc gg aa   uga  agau   uga      c
||||| ||| |||| |||| |||| |||||||||||| || || ||   |||  ||||   |||       
uagua cau ucuu uuag GUCC GUUGAGAGGAAA CG cc uu   acu  ucua   acu      a
     -   u    g    c    C            C  U  g  ---   --    ccu   uaauuc 

Annotation confidence Not enough data

Genome context

MA_112341: 19712-19845 [-]

Mature pab-miR399d

• Accession: MIMAT0044791
• Description: Picea abies pab-miR399d mature miRNA
• Sequence: 95 - UGCCAAAGGAGAGUUGCCCUG - 115
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918