Stem-loop pab-MIR399c

Accession

MI0036692

Description

Picea abies pab-MIR399c precursor miRNA

Literature search

1 open access papers mention pab-MIR399c
(1 sentences)

Sequence

auguaugggagaauuacaggauaacuuuccuuuugcagggaauugggauuucguuuuauguauuaauugcuccaucucgauugccCGCCAAAGGAGAGUUGCCCUGugauuguucuuugcau
(((((.((((.(((((((((.((((((((((((.((.((.(((((((((...((.(((.....)))..))...))))))))).)).)).)))))))))))).))))))))).)))).)))))

Structure

     u    g         a            u  a  g         uuc  -u   u 
augua ggga aauuacagg uaacuuuccuuu gc gg aauugggau   gu  uua g
||||| |||| ||||||||| |||||||||||| || || |||||||||   ||  ||| u
uacgu ucuu uuaguGUCC GUUGAGAGGAAA CG cc uuagcucua   cg  aau a
     u    g         C            C  C  g         ccu  uu   u 

Annotation confidence Not enough data

Genome context

MA_9071042: 612-733 [+]

Mature pab-miR399c

• Accession: MIMAT0044790
• Description: Picea abies pab-miR399c mature miRNA
• Sequence: 86 - CGCCAAAGGAGAGUUGCCCUG - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918