Stem-loop pab-MIR396q

Accession

MI0036663

Description

Picea abies pab-MIR396q precursor miRNA

Literature search

1 open access papers mention pab-MIR396q
(5 sentences)

Sequence

gaauccugucauauuuUUCCACGGCUUUCUUGAACUUcacgaucggcggcggcugauugcuucgauaacagaucuggauaacaagcucaagaaagccgagggaaaauauaaagggauuc
(((((((...((((((((((.((((((((((((.(((..((((((((....)))))))).((((((.....))).)))....))).)))))))))))).))))))))))...)))))))

Structure

       guc          A            A   ---------------------ca        g 
gaauccu   auauuuUUCC CGGCUUUCUUGA CUU                       cgaucggc g
|||||||   |||||||||| |||||||||||| |||                       ||||||||  
cuuaggg   uauaaaaggg gccgaaagaacu gaa                       guuagucg c
       aaa          a            c   caauaggucuagacaauagcuuc        g 

Annotation confidence Not enough data

Genome context

MA_68251: 10977-11095 [-]

Mature pab-miR396q

• Accession: MIMAT0044761
• Description: Picea abies pab-miR396q mature miRNA
• Sequence: 17 - UUCCACGGCUUUCUUGAACUU - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918