Stem-loop pab-MIR396e

Accession

MI0036651

Description

Picea abies pab-MIR396e precursor miRNA

Literature search

1 open access papers mention pab-MIR396e
(5 sentences)

Sequence

uucauauuuuccagcagcuuucuugaacuugauuuguuguauguauguaaacuuauaugcuuagaauaauaagaaagCUCAAGAAAGCUGUGGGAAAacaugga
(((((.((((((.(((((((((((((.(((...(((((.((.(((((((....))))))).)).))))).....))).))))))))))))).)))))).)))))

Structure

     a      a             a   --gau     g  u       a 
uucau uuuucc gcagcuuucuuga cuu     uuguu ua guaugua a
||||| |||||| ||||||||||||| |||     ||||| || |||||||  
aggua aAAAGG UGUCGAAAGAACU gaa     aauaa au cguauau c
     c      G             C   agaau     g  u       u 

Annotation confidence Not enough data

Genome context

MA_696166: 785-888 [-]

Mature pab-miR396e

• Accession: MIMAT0044749
• Description: Picea abies pab-miR396e mature miRNA
• Sequence: 78 - CUCAAGAAAGCUGUGGGAAA - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918