Stem-loop pab-MIR171d

Accession

MI0036621

Description

Picea abies pab-MIR171d precursor miRNA

Literature search

1 open access papers mention pab-MIR171d
(1 sentences)

Sequence

ggugcaaaggcgauauugacgugccucaauuugaagacauuguuagaggaauucuagcucugugcucugaUUGAGCCGCGUCAAUAUCCCCuucucuuuuucuuugccuuugccu
((.((((((((((((((((((((.(((((((.((..(((..((((((.....))))))..)))..)).))))))).)))))))))))).................))))))))))

Structure

  u        -----------------            c       u  ag   uu      g 
gg gcaaaggc                 gauauugacgug cucaauu ga  aca  guuaga g
|| ||||||||                 |||||||||||| ||||||| ||  |||  |||||| a
uc cguuuccg                 CUAUAACUGCGC GAGUUag cu  ugu  cgaucu a
  -        uuucuuuuucucuuCCC            C       u  cg   cu      u 

Annotation confidence Not enough data

Genome context

MA_10112686: 578-692 [+]

Mature pab-miR171d

• Accession: MIMAT0044719
• Description: Picea abies pab-miR171d mature miRNA
• Sequence: 71 - UUGAGCCGCGUCAAUAUCCCC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918