Stem-loop pab-MIR166d

Accession

MI0036602

Description

Picea abies pab-MIR166d precursor miRNA

Literature search

1 open access papers mention pab-MIR166d
(3 sentences)

Sequence

uguugggacggaugcagccuggcucgaugcuuaaacaguguauauaguuuuguuugagugCCGGACCAGGCUUCAUCCCCUucaa
((..(((...((((.(((((((.(((.(((((((((((...........))))))))))).))).))))))).)))))))..)).

Structure

-  uu   acg    c       c   a           ugua 
 ug  ggg   gaug agccugg ucg ugcuuaaacag    u
 ||  |||   |||| ||||||| ||| |||||||||||    a
 ac  CCC   CUAC UCGGACC GGC gugaguuuguu    u
a  uU   ---    U       A   C           uuga 

Annotation confidence Not enough data

Genome context

MA_545620: 1517-1601 [+]

Mature pab-miR166d

• Accession: MIMAT0044700
• Description: Picea abies pab-miR166d mature miRNA
• Sequence: 61 - CCGGACCAGGCUUCAUCCCCU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918