Stem-loop pab-MIR160f

Accession

MI0036595

Description

Picea abies pab-MIR160f precursor miRNA

Literature search

1 open access papers mention pab-MIR160f
(1 sentences)

Sequence

uguguuCUGCCUGGCUCCCUGUAUGCCaucucagaagcuugucaaaacacuugauaugcucuauaguuggcaugcagggagccaugcagaucccu
.....(((((.(((((((((((((((((.((.(((.((.((((((.....)))))).)))))..)).))))))))))))))))).))))).....

Structure

ugugu     C                 u  -c   a  u      a 
     uCUGC UGGCUCCCUGUAUGCCa cu  aga gc ugucaa a
     ||||| ||||||||||||||||| ||  ||| || |||||| c
     agacg accgagggacguacggu ga  ucu cg auaguu a
ucccu     u                 u  ua   -  u      c 

Annotation confidence Not enough data

Genome context

MA_9596675: 1363-1457 [-]

Mature pab-miR160f

• Accession: MIMAT0044693
• Description: Picea abies pab-miR160f mature miRNA
• Sequence: 7 - CUGCCUGGCUCCCUGUAUGCC - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918