Stem-loop pab-MIR160e

Accession

MI0036594

Description

Picea abies pab-MIR160e precursor miRNA

Literature search

1 open access papers mention pab-MIR160e
(1 sentences)

Sequence

ucaaaCUGCCUGGCUCCCUGUAUGCCaucuguguagcuuaucuggacauugauaugcgcauaguuggcauacagggauccaugcagaaguc
.....((((.(((.(((((((((((((.((((((.((.((((........)))).)))))))).))))))))))))).))).)))).....

Structure

ucaaa    C   C             u      a  u    ugg 
     CUGC UGG UCCCUGUAUGCCa cugugu gc uauc   a
     |||| ||| ||||||||||||| |||||| || ||||    
     gacg acc agggacauacggu gauacg cg auag   c
cugaa    u   u             u      -  u    uua 

Annotation confidence Not enough data

Genome context

MA_744037: 5846-5936 [-]

Mature pab-miR160e

• Accession: MIMAT0044692
• Description: Picea abies pab-miR160e mature miRNA
• Sequence: 6 - CUGCCUGGCUCCCUGUAUGCC - 26
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918