Stem-loop pab-MIR156i

Accession

MI0036569

Description

Picea abies pab-MIR156i precursor miRNA

Literature search

2 open access papers mention pab-MIR156i
(7 sentences)

Sequence

uccgcccaugucuuucugcgaguuuuuuucccuaugaguacugcgcauauuuggucgacaguuuccggcuuuugguuguauuuuuguuaaucaaggaaggaagaugcccuuguuggggaaggugcUGACAGAAGAGAGUGGGCACaga
...((((((.((((((((..(((.((((((((.(((((.(((((((.......).)).))))((((..((((.(((((.........)))))))))..))))......))))).)))))))).)))..))).))))))))))).....

Structure

--ucc      g     -   cg   u        u     uacugcgcauauuuggucgacagu    gg    u     uau 
     gcccau ucuuu cug  agu uuuuuccc augag                        uucc  cuuu gguug   u
     |||||| ||||| |||  ||| |||||||| |||||                        ||||  |||| |||||   u
     CGGGUG AGAGA GAC  Ucg ggaagggg uguuc                        aagg  ggaa cuaau   u
agaCA      -     A   AG   u        u     ------------------ccguag    aa    -     ugu 

Annotation confidence Not enough data

Genome context

MA_6092: 6316-6463 [-]

Mature pab-miR156i

• Accession: MIMAT0044667
• Description: Picea abies pab-miR156i mature miRNA
• Sequence: 126 - UGACAGAAGAGAGUGGGCAC - 145
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918