Stem-loop pab-MIR156f

Accession

MI0036566

Description

Picea abies pab-MIR156f precursor miRNA

Literature search

2 open access papers mention pab-MIR156f
(7 sentences)

Sequence

ggguuuguuggguaaggugcUGACAGAAGAGAGUGGGCACacauagguccuagcauuuccuguguguggaucgcugcgugcccauaucucuuacugucagcucuaaacagacggacgggccu
(((((((((.(((..((.((((((((((((((((((((((.((..(((((..((((.....))))..)))))..)).)))))))).)))))).)))))))).))..))...).)))))))))

Structure

         g ---  aa  u        -      -        a  ua     ua    u 
ggguuuguu g   gu  gg gcUGACAG AAGAGA GUGGGCAC ca  ggucc  gcau u
||||||||| |   ||  || |||||||| |||||| |||||||| ||  |||||  |||| c
uccgggcag c   ca  uc cgacuguc uucucu uacccgug gu  cuagg  ugug c
         g aga  aa  u        a      a        c  cg     ug    u 

Annotation confidence Not enough data

Genome context

MA_3007716: 181-302 [+]

Mature pab-miR156f

• Accession: MIMAT0044664
• Description: Picea abies pab-miR156f mature miRNA
• Sequence: 21 - UGACAGAAGAGAGUGGGCAC - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918