Stem-loop pab-MIR156e

Accession

MI0036565

Description

Picea abies pab-MIR156e precursor miRNA

Literature search

2 open access papers mention pab-MIR156e
(7 sentences)

Sequence

guuggauaaggugcUGACAGAAGAGAGUGGGCACacauaaccccuagcauuguuuauguguggagcgaugcgugcccaccgucucuugcugucagcucucaacggac
((((....(((.((((((((((((((((((((((.(((..(.((..((((.....))))..)).)..))).))))))))..)))))).)))))))))))))))....

Structure

----    gaua   u        -      --        a   aa c  ua    u 
    guug    agg gcUGACAG AAGAGA  GUGGGCAC cau  c cc  gcau g
    ||||    ||| |||||||| ||||||  |||||||| |||  | ||  |||| u
    caac    ucu cgacuguc uucucu  cacccgug gua  g gg  ugua u
cagg    ----   -        g      gc        c   gc a  ug    u 

Annotation confidence Not enough data

Genome context

MA_25075: 40194-40300 [-]

Mature pab-miR156e

• Accession: MIMAT0044663
• Description: Picea abies pab-miR156e mature miRNA
• Sequence: 15 - UGACAGAAGAGAGUGGGCAC - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918