Stem-loop pab-MIR156b

Accession

MI0036562

Description

Picea abies pab-MIR156b precursor miRNA

Literature search

2 open access papers mention pab-MIR156b
(7 sentences)

Sequence

gaagggcuuguuggguaaggugcUGACAGAAGAGAGUGGGCACacauagccccuagcauuucuuguguggggggcgcugcgugcccauaucucuuucugucagcucucaacggaaggacggucuuc
(((((.(((.((..((..((.((((((((((((((((((((((.((..((((((.((((.....)))).))))))..)).)))))))).)))).)))))))))).))..))..)).)).).)))))

Structure

     g -  g  gg  aa  u          -    -        a  ua      a    u 
gaagg c uu uu  gu  gg gcUGACAGAA GAGA GUGGGCAC ca  gccccu gcau u
||||| | || ||  ||  || |||||||||| |||| |||||||| ||  |||||| |||| c
cuucu g ag aa  ca  uc cgacugucuu cucu uacccgug gu  cggggg ugug u
     g c  g  gg  ac  u          u    a        c  cg      g    u 

Annotation confidence Not enough data

Genome context

MA_1131: 52188-52313 [-]

Mature pab-miR156b

• Accession: MIMAT0044660
• Description: Picea abies pab-miR156b mature miRNA
• Sequence: 24 - UGACAGAAGAGAGUGGGCAC - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918