Stem-loop osa-MIR11342

Accession

MI0036495

Description

Oryza sativa osa-MIR11342 precursor miRNA

Sequence

4125 reads, 16.0 reads per million, 133 experiments

gccuaacaaaaauuAUCUCGAGAUAUCGGUACCUCAUGguacugugagguaccgguACCUAAGGUACUUUUUGUUGGGCC
((((((((((((.(((((..((.((((((((((((((......)))))))))))))).)).))))).)))))))))))).

Structure

-            u     CG  A              Gg 
 gccuaacaaaaa uAUCU  AG UAUCGGUACCUCAU  u
 |||||||||||| |||||  || ||||||||||||||   
 CGGGUUGUUUUU AUGGA  UC Auggccauggagug  a
C            C     -A  C              uc 

Annotation confidence Low

Genome context

10: 21166673-21166752 [+]

Mature osa-miR11342-5p

• Accession: MIMAT0044642
• Description: Oryza sativa osa-miR11342-5p mature miRNA
• Sequence: 15 - AUCUCGAGAUAUCGGUACCUCAUG - 38
• Evidence: experimental ; Illumina [1]

Mature osa-miR11342-3p

• Accession: MIMAT0044643
• Description: Oryza sativa osa-miR11342-3p mature miRNA
• Sequence: 57 - ACCUAAGGUACUUUUUGUUGGGCC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26083154
   MicroRNA-mediated regulation of gene expression in the response of rice plants to fungal elicitors
   "Baldrich P, Campo S, Wu MT, Liu TT, Hsing YI, San Segundo B"
   "RNA Biol (2015) 12:847-863