Stem-loop osa-MIR11339

Accession

MI0036490

Description

Oryza sativa osa-MIR11339 precursor miRNA

Sequence

656587 reads, 2497.0 reads per million, 142 experiments

uacucccuccuuuucagguuAUAAGACUUUCUAGCAUUgcccacauucauauagauguuaauuaaucuaggcacauauauaugucuagauucauuaacauauaUAUGAAUGUGGGCAAUGCUAGaaagucuuauaauaugaaacagauaaagua
((((...((..(((((.((((((((((((((((((((((((((((((((((((.((((((((.((((((((((........)))))))))).)))))))).)))))))))))))))))))))))))))))))))))).)))))..))...))))

Structure

    ccc  cu     g                                    g        u          cau 
uacu   uc  uuuca guuAUAAGACUUUCUAGCAUUgcccacauucauaua auguuaau aaucuaggca   a
||||   ||  ||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
auga   ag  aaagu uaauauucugaaaGAUCGUAACGGGUGUAAGUAUau uacaauua uuagaucugu   u
    aau  ac     a                                    a        c          aua 

Annotation confidence Low

Genome context

1: 10371765-10371918 [+]

Mature osa-miR11339-5p

• Accession: MIMAT0044632
• Description: Oryza sativa osa-miR11339-5p mature miRNA
• Sequence: 21 - AUAAGACUUUCUAGCAUU - 38
• Evidence: experimental ; Illumina [1]

Mature osa-miR11339-3p

• Accession: MIMAT0044633
• Description: Oryza sativa osa-miR11339-3p mature miRNA
• Sequence: 104 - UAUGAAUGUGGGCAAUGCUAG - 124
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26083154
   MicroRNA-mediated regulation of gene expression in the response of rice plants to fungal elicitors
   "Baldrich P, Campo S, Wu MT, Liu TT, Hsing YI, San Segundo B"
   "RNA Biol (2015) 12:847-863